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View code on Github</a>
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<h1>在 Cora 数据集上训练图形注意力网络 v2 (GATv2)</h1>
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<p><a href="https://app.labml.ai/run/34b1e2f6ed6f11ebb860997901a2d1e3"><img alt="View Run" src="https://img.shields.io/badge/labml-experiment-brightgreen"></a></p>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">13</span><span></span><span class="kn">import</span> <span class="nn">torch</span>
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<span class="lineno">14</span><span class="kn">from</span> <span class="nn">torch</span> <span class="kn">import</span> <span class="n">nn</span>
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<span class="lineno">15</span>
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<span class="lineno">16</span><span class="kn">from</span> <span class="nn">labml</span> <span class="kn">import</span> <span class="n">experiment</span>
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<span class="lineno">17</span><span class="kn">from</span> <span class="nn">labml.configs</span> <span class="kn">import</span> <span class="n">option</span>
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<span class="lineno">18</span><span class="kn">from</span> <span class="nn">labml_helpers.module</span> <span class="kn">import</span> <span class="n">Module</span>
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<span class="lineno">19</span><span class="kn">from</span> <span class="nn">labml_nn.graphs.gat.experiment</span> <span class="kn">import</span> <span class="n">Configs</span> <span class="k">as</span> <span class="n">GATConfigs</span>
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<span class="lineno">20</span><span class="kn">from</span> <span class="nn">labml_nn.graphs.gatv2</span> <span class="kn">import</span> <span class="n">GraphAttentionV2Layer</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-1'>
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<div class='docs doc-strings'>
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<div class='section-link'>
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<a href='#section-1'>#</a>
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</div>
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<h2>Graph 注意力网络 v2 (GATv2)</h2>
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<p>这个图形关注网络有两个<a href="index.html">图形关注层</a>。</p>
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</div>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">23</span><span class="k">class</span> <span class="nc">GATv2</span><span class="p">(</span><span class="n">Module</span><span class="p">):</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-2'>
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<div class='docs doc-strings'>
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<div class='section-link'>
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<a href='#section-2'>#</a>
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</div>
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<ul><li><code class="highlight"><span></span><span class="n">in_features</span></code>
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是每个节点的要素数</li>
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<li><code class="highlight"><span></span><span class="n">n_hidden</span></code>
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是第一个图形关注层中的要素数</li>
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<li><code class="highlight"><span></span><span class="n">n_classes</span></code>
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是类的数量</li>
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<li><code class="highlight"><span></span><span class="n">n_heads</span></code>
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是图表关注层中的头部数量</li>
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<li><code class="highlight"><span></span><span class="n">dropout</span></code>
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是辍学概率</li>
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<li><code class="highlight"><span></span><span class="n">share_weights</span></code>
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如果设置为 True，则同一矩阵将应用于每条边的源节点和目标节点</li></ul>
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</div>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">30</span> <span class="k">def</span> <span class="fm">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">in_features</span><span class="p">:</span> <span class="nb">int</span><span class="p">,</span> <span class="n">n_hidden</span><span class="p">:</span> <span class="nb">int</span><span class="p">,</span> <span class="n">n_classes</span><span class="p">:</span> <span class="nb">int</span><span class="p">,</span> <span class="n">n_heads</span><span class="p">:</span> <span class="nb">int</span><span class="p">,</span> <span class="n">dropout</span><span class="p">:</span> <span class="nb">float</span><span class="p">,</span>
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<span class="lineno">31</span> <span class="n">share_weights</span><span class="p">:</span> <span class="nb">bool</span> <span class="o">=</span> <span class="kc">True</span><span class="p">):</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-3'>
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<div class='docs'>
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<div class='section-link'>
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<a href='#section-3'>#</a>
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</div>
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</div>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">40</span> <span class="nb">super</span><span class="p">()</span><span class="o">.</span><span class="fm">__init__</span><span class="p">()</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-4'>
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<div class='docs'>
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<div class='section-link'>
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<a href='#section-4'>#</a>
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</div>
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<p>我们连接头部的第一个图形注意层</p>
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</div>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">43</span> <span class="bp">self</span><span class="o">.</span><span class="n">layer1</span> <span class="o">=</span> <span class="n">GraphAttentionV2Layer</span><span class="p">(</span><span class="n">in_features</span><span class="p">,</span> <span class="n">n_hidden</span><span class="p">,</span> <span class="n">n_heads</span><span class="p">,</span>
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<span class="lineno">44</span> <span class="n">is_concat</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">dropout</span><span class="o">=</span><span class="n">dropout</span><span class="p">,</span> <span class="n">share_weights</span><span class="o">=</span><span class="n">share_weights</span><span class="p">)</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-5'>
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<div class='docs'>
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<div class='section-link'>
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<a href='#section-5'>#</a>
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</div>
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<p>第一个图形关注层之后的激活功能</p>
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</div>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">46</span> <span class="bp">self</span><span class="o">.</span><span class="n">activation</span> <span class="o">=</span> <span class="n">nn</span><span class="o">.</span><span class="n">ELU</span><span class="p">()</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-6'>
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<div class='docs'>
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<div class='section-link'>
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<a href='#section-6'>#</a>
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</div>
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<p>最后一张图关注层，我们平均头部</p>
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</div>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">48</span> <span class="bp">self</span><span class="o">.</span><span class="n">output</span> <span class="o">=</span> <span class="n">GraphAttentionV2Layer</span><span class="p">(</span><span class="n">n_hidden</span><span class="p">,</span> <span class="n">n_classes</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span>
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<span class="lineno">49</span> <span class="n">is_concat</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">dropout</span><span class="o">=</span><span class="n">dropout</span><span class="p">,</span> <span class="n">share_weights</span><span class="o">=</span><span class="n">share_weights</span><span class="p">)</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-7'>
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<div class='docs'>
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<div class='section-link'>
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<a href='#section-7'>#</a>
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</div>
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<p>辍学</p>
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</div>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">51</span> <span class="bp">self</span><span class="o">.</span><span class="n">dropout</span> <span class="o">=</span> <span class="n">nn</span><span class="o">.</span><span class="n">Dropout</span><span class="p">(</span><span class="n">dropout</span><span class="p">)</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-8'>
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<div class='docs doc-strings'>
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<div class='section-link'>
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<a href='#section-8'>#</a>
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</div>
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<ul><li><code class="highlight"><span></span><span class="n">x</span></code>
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是形状的特征向量<code class="highlight"><span></span><span class="p">[</span><span class="n">n_nodes</span><span class="p">,</span> <span class="n">in_features</span><span class="p">]</span></code>
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</li>
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<li><code class="highlight"><span></span><span class="n">adj_mat</span></code>
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是形式的邻接矩阵<code class="highlight"><span></span><span class="p">[</span><span class="n">n_nodes</span><span class="p">,</span> <span class="n">n_nodes</span><span class="p">,</span> <span class="n">n_heads</span><span class="p">]</span></code>
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或<code class="highlight"><span></span><span class="p">[</span><span class="n">n_nodes</span><span class="p">,</span> <span class="n">n_nodes</span><span class="p">,</span> <span class="mi">1</span><span class="p">]</span></code>
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</li></ul>
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</div>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">53</span> <span class="k">def</span> <span class="nf">forward</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">x</span><span class="p">:</span> <span class="n">torch</span><span class="o">.</span><span class="n">Tensor</span><span class="p">,</span> <span class="n">adj_mat</span><span class="p">:</span> <span class="n">torch</span><span class="o">.</span><span class="n">Tensor</span><span class="p">):</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-9'>
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<div class='docs'>
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<div class='section-link'>
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<a href='#section-9'>#</a>
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</div>
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<p>将丢失应用于输入</p>
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</div>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">60</span> <span class="n">x</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">dropout</span><span class="p">(</span><span class="n">x</span><span class="p">)</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-10'>
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<div class='docs'>
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<div class='section-link'>
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<a href='#section-10'>#</a>
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</div>
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<p>第一个图形关注层</p>
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</div>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">62</span> <span class="n">x</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">layer1</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">adj_mat</span><span class="p">)</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-11'>
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<div class='docs'>
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<div class='section-link'>
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<a href='#section-11'>#</a>
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</div>
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<p>激活功能</p>
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</div>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">64</span> <span class="n">x</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">activation</span><span class="p">(</span><span class="n">x</span><span class="p">)</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-12'>
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<div class='docs'>
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<div class='section-link'>
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<a href='#section-12'>#</a>
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</div>
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<p>辍学</p>
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</div>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">66</span> <span class="n">x</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">dropout</span><span class="p">(</span><span class="n">x</span><span class="p">)</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-13'>
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<div class='docs'>
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<div class='section-link'>
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<a href='#section-13'>#</a>
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</div>
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<p>logits 的输出层（未激活）</p>
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</div>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">68</span> <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">output</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">adj_mat</span><span class="p">)</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-14'>
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<div class='docs doc-strings'>
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<div class='section-link'>
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<a href='#section-14'>#</a>
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</div>
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<h2>配置</h2>
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<p>由于实验与 <a href="../gat/experiment.html">GAT 实验</a>相同，但使用 G <a href="index.html">ATv2 模型</a>，我们扩展了相同的配置并更改了模型。</p>
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</div>
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<div class='code'>
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<div class="highlight"><pre><span class="lineno">71</span><span class="k">class</span> <span class="nc">Configs</span><span class="p">(</span><span class="n">GATConfigs</span><span class="p">):</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-15'>
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<div class='docs'>
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<div class='section-link'>
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<a href='#section-15'>#</a>
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</div>
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<p>是否共享边的源节点和目标节点的权重</p>
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</div>
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<div class='code'>
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||
<div class="highlight"><pre><span class="lineno">80</span> <span class="n">share_weights</span><span class="p">:</span> <span class="nb">bool</span> <span class="o">=</span> <span class="kc">False</span></pre></div>
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</div>
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</div>
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<div class='section' id='section-16'>
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<div class='docs'>
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<div class='section-link'>
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<a href='#section-16'>#</a>
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</div>
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<p>设置模型</p>
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</div>
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<div class='code'>
|
||
<div class="highlight"><pre><span class="lineno">82</span> <span class="n">model</span><span class="p">:</span> <span class="n">GATv2</span> <span class="o">=</span> <span class="s1">'gat_v2_model'</span></pre></div>
|
||
</div>
|
||
</div>
|
||
<div class='section' id='section-17'>
|
||
<div class='docs doc-strings'>
|
||
<div class='section-link'>
|
||
<a href='#section-17'>#</a>
|
||
</div>
|
||
<p>创建 GATv2 模型</p>
|
||
|
||
</div>
|
||
<div class='code'>
|
||
<div class="highlight"><pre><span class="lineno">85</span><span class="nd">@option</span><span class="p">(</span><span class="n">Configs</span><span class="o">.</span><span class="n">model</span><span class="p">)</span>
|
||
<span class="lineno">86</span><span class="k">def</span> <span class="nf">gat_v2_model</span><span class="p">(</span><span class="n">c</span><span class="p">:</span> <span class="n">Configs</span><span class="p">):</span></pre></div>
|
||
</div>
|
||
</div>
|
||
<div class='section' id='section-18'>
|
||
<div class='docs'>
|
||
<div class='section-link'>
|
||
<a href='#section-18'>#</a>
|
||
</div>
|
||
|
||
</div>
|
||
<div class='code'>
|
||
<div class="highlight"><pre><span class="lineno">90</span> <span class="k">return</span> <span class="n">GATv2</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">in_features</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">n_hidden</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">n_classes</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">n_heads</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">dropout</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">share_weights</span><span class="p">)</span><span class="o">.</span><span class="n">to</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">device</span><span class="p">)</span></pre></div>
|
||
</div>
|
||
</div>
|
||
<div class='section' id='section-19'>
|
||
<div class='docs'>
|
||
<div class='section-link'>
|
||
<a href='#section-19'>#</a>
|
||
</div>
|
||
|
||
</div>
|
||
<div class='code'>
|
||
<div class="highlight"><pre><span class="lineno">93</span><span class="k">def</span> <span class="nf">main</span><span class="p">():</span></pre></div>
|
||
</div>
|
||
</div>
|
||
<div class='section' id='section-20'>
|
||
<div class='docs'>
|
||
<div class='section-link'>
|
||
<a href='#section-20'>#</a>
|
||
</div>
|
||
<p>创建配置</p>
|
||
|
||
</div>
|
||
<div class='code'>
|
||
<div class="highlight"><pre><span class="lineno">95</span> <span class="n">conf</span> <span class="o">=</span> <span class="n">Configs</span><span class="p">()</span></pre></div>
|
||
</div>
|
||
</div>
|
||
<div class='section' id='section-21'>
|
||
<div class='docs'>
|
||
<div class='section-link'>
|
||
<a href='#section-21'>#</a>
|
||
</div>
|
||
<p>创建实验</p>
|
||
|
||
</div>
|
||
<div class='code'>
|
||
<div class="highlight"><pre><span class="lineno">97</span> <span class="n">experiment</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="n">name</span><span class="o">=</span><span class="s1">'gatv2'</span><span class="p">)</span></pre></div>
|
||
</div>
|
||
</div>
|
||
<div class='section' id='section-22'>
|
||
<div class='docs'>
|
||
<div class='section-link'>
|
||
<a href='#section-22'>#</a>
|
||
</div>
|
||
<p>计算配置。</p>
|
||
|
||
</div>
|
||
<div class='code'>
|
||
<div class="highlight"><pre><span class="lineno">99</span> <span class="n">experiment</span><span class="o">.</span><span class="n">configs</span><span class="p">(</span><span class="n">conf</span><span class="p">,</span> <span class="p">{</span></pre></div>
|
||
</div>
|
||
</div>
|
||
<div class='section' id='section-23'>
|
||
<div class='docs'>
|
||
<div class='section-link'>
|
||
<a href='#section-23'>#</a>
|
||
</div>
|
||
<p>Adam 优化器</p>
|
||
|
||
</div>
|
||
<div class='code'>
|
||
<div class="highlight"><pre><span class="lineno">101</span> <span class="s1">'optimizer.optimizer'</span><span class="p">:</span> <span class="s1">'Adam'</span><span class="p">,</span>
|
||
<span class="lineno">102</span> <span class="s1">'optimizer.learning_rate'</span><span class="p">:</span> <span class="mf">5e-3</span><span class="p">,</span>
|
||
<span class="lineno">103</span> <span class="s1">'optimizer.weight_decay'</span><span class="p">:</span> <span class="mf">5e-4</span><span class="p">,</span>
|
||
<span class="lineno">104</span>
|
||
<span class="lineno">105</span> <span class="s1">'dropout'</span><span class="p">:</span> <span class="mf">0.7</span><span class="p">,</span>
|
||
<span class="lineno">106</span> <span class="p">})</span></pre></div>
|
||
</div>
|
||
</div>
|
||
<div class='section' id='section-24'>
|
||
<div class='docs'>
|
||
<div class='section-link'>
|
||
<a href='#section-24'>#</a>
|
||
</div>
|
||
<p>开始观看实验</p>
|
||
|
||
</div>
|
||
<div class='code'>
|
||
<div class="highlight"><pre><span class="lineno">109</span> <span class="k">with</span> <span class="n">experiment</span><span class="o">.</span><span class="n">start</span><span class="p">():</span></pre></div>
|
||
</div>
|
||
</div>
|
||
<div class='section' id='section-25'>
|
||
<div class='docs'>
|
||
<div class='section-link'>
|
||
<a href='#section-25'>#</a>
|
||
</div>
|
||
<p>运行训练</p>
|
||
|
||
</div>
|
||
<div class='code'>
|
||
<div class="highlight"><pre><span class="lineno">111</span> <span class="n">conf</span><span class="o">.</span><span class="n">run</span><span class="p">()</span></pre></div>
|
||
</div>
|
||
</div>
|
||
<div class='section' id='section-26'>
|
||
<div class='docs'>
|
||
<div class='section-link'>
|
||
<a href='#section-26'>#</a>
|
||
</div>
|
||
<p></p>
|
||
|
||
</div>
|
||
<div class='code'>
|
||
<div class="highlight"><pre><span class="lineno">115</span><span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s1">'__main__'</span><span class="p">:</span>
|
||
<span class="lineno">116</span> <span class="n">main</span><span class="p">()</span></pre></div>
|
||
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|
||
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|
||
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|
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<a href="https://papers.labml.ai">Trending Research Papers</a>
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